BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032B10SP1|AL429526
(878 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig879 1254 0.0
3x_Contig782 139 1e-32
>3x_Contig879
Length = 2855
Score = 1254 bits (632), Expect = 0.0
Identities = 700/722 (96%), Gaps = 1/722 (0%)
Strand = Plus / Plus
Query: 1 tttactcaaaaacacgcaaggtaattctttggacgatatcttgttcccttcatttaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1951 tttactcaaaaacacgcaaggtaattctttggacgatatcttgttcccttcatttaagaa 2010
Query: 61 agatttattgacataccaatctgttaaaagagaaagaagaatcaactcacatatgtggtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2011 agatttattgacataccaatctgttaaaagagaaagaagaatcaactcacatatgtggtt 2070
Query: 121 tgcgaagtttaatattaacgggcaattattgctcaaagatccatcacagttgtcaggctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2071 tgcgaagtttaatattaacgggcaattattgctcaaagatccatcacagttgtcaggctg 2130
Query: 181 taagcagatcgtgtttcagtccaacttgccaataaataaatcttcttttgacaatgtgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2131 taagcagatcgtgtttcagtccaacttgccaataaataaatcttcttttgacaatgtgtt 2190
Query: 241 cgcctcttatctgaacacatccatagtcaactccagaccaaatggttatcctcttgttgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2191 cgcctcttatctgaacacatccatagtcaactccagaccaaatggttatcctcttgttgg 2250
Query: 301 gaaatgttccttacagttcgataatcttgcttctgcatattctgatgtcccaaatgaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2251 gaaatgttccttacagttcgataatcttgcttctgcatattctgatgtcccaaatgaaga 2310
Query: 361 caaaatattgaagttagcatccattttgtttgatcctctttcccttccatacgctgtcaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2311 caaaatattgaagttagcatccattttgtttgatcctctttcccttccatacgctgtcaa 2370
Query: 421 ttccccagaagttgaaaaagttcttattaaaaaacaacggcatgcaaagctctgtggatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2371 ttccccagaagttgaaaaagttcttattaaaaaacaacggcatgcaaagctctgtggatg 2430
Query: 481 gatagtcgatgaaacaagggctgagattgattctatgctatccactgcttctgatattca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2431 gatagtcgatgaaacaagggctgagattgattctatgctatccactgcttctgatattca 2490
Query: 541 gaaaatacttcttttcctctctgtcaacgamatagaaaaagaattcaaagacggctataa 600
|||||||||||||||||||||||||||||| || | ||| | |||||||||||||||||
Sbjct: 2491 gaaaatacttcttttcctctctgtcaacgacattgtaaatg-cttcaaagacggctataa 2549
Query: 601 tttccaaaaacaaacatttatctgttttgataacgttactggggtccaatgatccaattg 660
||||||||||||||||||||||| |||| ||||| ||||| |||||| |||||||||
Sbjct: 2550 tttccaaaaacaaacatttatctttttttataactttacttttttccaattatccaattg 2609
Query: 661 ttcgtgaaatcgcgcaactacagttaactaaatggaaatctttaggctctatagtggatc 720
||||| ||||| | |||||||| |||||||||| |||||||||| |||| ||||| ||||
Sbjct: 2610 ttcgttaaatctctcaactacatttaactaaattgaaatctttatgctccatagttgatc 2669
Query: 721 ca 722
||
Sbjct: 2670 ca 2671
>3x_Contig782
Length = 2529
Score = 139 bits (70), Expect = 1e-32
Identities = 79/81 (97%), Gaps = 1/81 (1%)
Strand = Plus / Minus
Query: 799 tttcgcggttagtgaat-ttaggtttacaagtatattatggagatatcgattcattgact 857
||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2529 tttcgcggttagtgaatnttaggtttacaagtatattatgnagatatcgattcattgact 2470
Query: 858 ctagaagatttgattatgaat 878
|||||||||||||||||||||
Sbjct: 2469 ctagaagatttgattatgaat 2449
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7900
Number of Sequences: 1807
Number of extensions: 7900
Number of successful extensions: 60
Number of sequences better than 1.0e-20: 2
length of query: 878
length of database: 10,358,551
effective HSP length: 16
effective length of query: 862
effective length of database: 10,329,639
effective search space: 8904148818
effective search space used: 8904148818
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)